The nitrogen crisis: what are the solutions?

An expert group gathers to discuss this elemental problem. The John Innes Centre’s Allan Downie reports on problems and progress.

Allan Downie

What is the nitrogen crisis? It is clear that we have introduced major global shifts in production and use of reactive nitrogen without really knowing what happens to the ammonia and nitrogen oxides released to the environment.

The production of nitrogen fertiliser and combustion of fossil fuels doubles the amount of reactive N entering the nitrogen cycle annually.

At a meeting entitled ‘The Nitrogen Crisis: what are the solutions?’ held recently in Oxford, UK, David Fowler (Centre for Ecology and Hydrology, Edinburgh) explained how the resulting atmospheric and marine pollution has an estimated cost of Є70-300Bn (mostly due to human health effects) in Europe and that the problem is likely to get worse with climate change.

Run-off from the use of nitrogen-based fertilisers can cause damaging algal blooms in aquatic habitats.

Mark Sutton (Centre for Ecology and Hydrology Edinburgh and co-chair of the UNECE task force on reactive nitrogen) made the case for introducing international protocols to improve the use of the reactive N we currently produce. To put this into perspective, based on current use, the survival and feeding of about half the world’s population depends on the application of nitrogen fertiliser to crops. However, in Europe, only a small fraction of this N (less than 5%) ends up in our mouths as food!

Fertile ground

One issue is that there are no costs to users of effectively losing (or dumping) reactive N into the atmosphere or oceans; but society will pay in the end as nitrogen pollution increases. As Charles Godfrey (population ecologist at University of Oxford) pointed out, if this is our position now, consider the consequences if, as predicted, the human population increases by 50% to 10-11 billion.

There are actions we can, we must, take to ameliorate these issues.

Europe is a very high user of nitrogen-containing fertilisers (yellow is high; purple low)

However there is very little political will for a global approach to deal with this among the main polluters of North America, Europe and China. For example, replacing 25-50% of European consumption of animal-derived foods with plant-based foods could cut nitrogen emissions by 40%, greenhouse gas emissions by 25-40% and per capita use of cropland by about 23%.

Paradoxically, lack of nitrogen fertiliser is one of the main limitations on food production in several countries, especially in sub-Saharan Africa, due to a lack of money and infrastructure for distribution of fertilisers.

Theoretically, nitrogen-fixing leguminous plants such as peas, beans and lentils can resolve part of this problem, due to their symbiosis with bacteria (rhizobia) that can reduce N2 to NH3; this can supply all the nitrogen required by the plants with relatively low losses to environmental pollution.

However, as pointed out by Alfred Gaythorne-Hardy (Oxford India Centre for Sustainable Development), unlike the increased production of almost all other crops in India, the growth of legume grains has remained unchanged over 60 years. So production per capita has fallen by about a third, even though in terms of ecology and human (and animal) nutrition, legumes are an excellent complement to growing cereals.

Cover crop Fabaceae showing nitrogen-fixing root nodules with the bacteria Bradyrhizobium.

Lack of increase in growth of grain legumes is due to subsidised supply of fertilisers, difficulties in managing legume crops and to economic factors – legume crop yields are lower than for cereals. John Howieson (Murdoch University, West Australia) explained that even in West Australia, where leguminous lupins became a useful break crop, over the last 15 years growers have replaced lupins with canola (oilseed rape). Low prices, problems with both weed control and introducing legumes in poor soils all contributed to the change. So, even in highly advanced agronomies legumes may be falling out of favour, while in the meantime pollution with reactive nitrogen gets worse.

Fixing the future

So what can we do with crops? Ken Giller (University of Wageningen) described some genuine success stories in Africa with introductions of appropriate legumes and their inoculants. A key message for transfer of technology to Africa was that a lot of effort is needed: knowledge transfer was essential, as was tailoring the legume crop and inoculant for each situation.

Plants need nitrogen, as the nitrogen deficient plants on the right with yellowing chlorosis show.

Other options for improving the situation worldwide include: a) breeding crops with optimal nitrogen use efficiency; b) generating legumes that can be managed/grown more easily; for example in the Global Food Security programme BBSRC are looking at breeding ‘superlupins’ as animal feeds, c) identifying crop varieties that associate with nitrogen-fixing bacteria (as with sugar cane and as described by Jean-Michel Ane at University of Wisconsin, with an unusual variety of maize); and d) possibly to enhance nitrogen transfer to plants by root-associated and/or endophytic nitrogen-fixing bacteria.

In the longer term it may be possible to genetically engineer cereal plants to fix nitrogen. Ray Dixon and John Peters discussed what genes would be required for production and assembly of the nitrogen fixing complex and its cofactors, in organelles like chloroplasts or mitochondria. As explained by Giles Oldroyd, an alternative approach could be to engineer non-legumes such as maize to be able to interact with nitrogen-fixing rhizobia.

Even a very inefficient symbiosis could have a significant impact, particularly in Africa. However, the problems with achieving such genetically engineered solutions are enormous and we do not yet know whether they will be surmountable.

An algal bloom in Dianchi Lake, China. Action is needed to prevent and tackle the pollution caused by nitrogen (and phosphorus) based fertilisers.

In the meantime we should be taking actions now to optimise our use of fertiliser and identify ways of ameliorating pollution caused by reactive nitrogen.

As a first step, perhaps we should consider reducing the amount of animal-derived foodstuffs we consume, while the scientists and agronomists try to optimise use of existing nitrogen-fixing crops and explore improvements in nitrogen use efficiency in all crops.

Add your comment.

About Allan Downie

Allan Downie has been working on rhizobial-legume nitrogen-fixing symbioses for over 30 years. He is now an Emeritus Fellow at the John Innes Centre in Norwich and Honorary Professor at the University of East Anglia.

4 thoughts on “The nitrogen crisis: what are the solutions?

  1. A hugely important subject. Until N- fertilizer producers internalise the costs of environmental and climate change damage in the price of their products, there will be no incentive to raise N-application efficiencies and legume-based BNF will remain non-competitive. As Brazil’s sugar cane experience shows, since Dobereiner’s work in the 70s, there is much to be learnt about BNF in non-leguminous species. Given that BNF systems produce few benefits for industry (except from inoculum sales), there is a need for massive public funding of BNF related research.
    Andrew MacMillan

  2. Thank you for your comments: you are spot on when you make the point that the costs of N fertilisers should ultimately reflect the costs of environmental pollution. However in addition to that there are regulations and agreements that could be introduced at governmental/inter-governmental level. For example in Denmark there is legislation that limits mineral (Haber Bosch) nitrogen application rates: between about 1990 and 2000, that led to a 50% reduction in mineral N application in Denmark. It was associated with a drop in yield and more efficient use of farmland waste. One of the other points raised by Mark Sutton at the meeting was that muck spreading by old-style muck spreaders adds significantly to atmospheric ammonia pollution. This can be reduced with modern spreaders, but again there is no incentive for the farmer to replace functional but polluting machinery.

    With regard to biological nitrogen fixation, you are right in making the point that publically funded research will be critical. However the Bill and Melinda Gates Foundation have put in significant funding, particularly with the aim of trying to help with the lack of N-fertilisers in Africa (see;;

  3. Thanks for a great discussion on an important issue. I’ll add that we now add more industrially fixed nitrogen to the biosphere than all sources of biological nitrogen fixation combined. This amounts to a risky experiment that is being carried out at great cost to our health and our fisheries. Its encouraging to see that Denmark has successfully acted to limit the problem, hopefully this can serve as a blueprint for other nations.

  4. If we were to internalise all the externalities of fertiliser use, shouldn’t we consider also the positive externalities e.g. prevention of hunger, economic growth and reduction in land requirement for agriculture through greater yields? I think these should certainly be brought into the equation because they are used to justify current fertiliser subsidy schemes.

Leave a Reply

Your email address will not be published. Required fields are marked *

Latest blog post

Why UK researchers are needed to achieve diets that nourish, rather than just feed people

Following the previous blog from Riaz Bhunnoo, Head of Global Food Security, on the opportunity for further research into food security using a ‘food systems’ approach, Professor Alastair Ager, Deputy Chief Scientific Adviser at the Department for International Development (DFID) explains why there is a need for this cross-cutting research and the challenges he hopes this will address.

Read more - Why UK researchers are needed to achieve diets that nourish, rather than just feed people

Sign up to our Newsletter